Gene correlation targeted analysis permits to know the linear dependence between each pair of the 2 to 10 submitted genes.
Fill the textbox with at least two and up to ten actualised* gene symbols.
Gene symbols must be entered separately and validated one at a time (e.g.: SERPINE1 (enter)
UBE2C (enter) TACC3...).
Click then on the "Submit" button.
Results page displays first
correlation map corresponding
to analysis with all patients.
Help to interpret correlation coefficient value is available by clicking on the "?" symbol below the colour scale.
Correlation maps corresponding to analysis with patients with positive or negative oestrogen receptor status and those corresponding
to analysis with patients from the four molecular subtypes, as determined by the
and as determined by basal-like PAM50 subtyped and/or triple negative breast cancer typed by immunohistochemistry
can be displayed by clicking on the corresponding button in the left menu.
For each pair of genes,
can be displayed, along with correlation coefficient value,
corresponding p-value and number of patients involved, by clicking on the corresponding cell in the correlation map.
Correlation maps can be saved in png format.
Tables with all detailed values (correlation coefficient, p-value, number of patients) can be saved in csv format.